Anaconda environment details
The following packages are required to run the scripts in this repository.
Warning
The environment isn’t provided in the repository, you need to generate it by yourself.
Dependencies
The following python packages are required to run the scripts in this repository:
numpyscipymatplotlibpandaspyvistavtkh5pyipykerneljupyter
You may need also access to Comsol and Matlab excutable.
Installation
Install Anaconda and create an enviroment with all dependencies list in conda environment.
conda env create -f environment.yml
conda activate myenv
enviroment.yml
name: /Users/alessandromastrofini/LocalFiles/acePlaque-PV/T00_Common/mesherENV_PV
channels:
- defaults
- conda-forge
dependencies:
- aiohttp=3.9.5
- alabaster=0.7.16
- appnope=0.1.4
- asttokens=2.4.1
- beautifulsoup4=4.12.3
- blosc=1.21.3
- brotli-python=1.0.9
- bzip2=1.0.8
- c-ares=1.33.1
- c-blosc2=2.12.0
- ca-certificates=2024.7.2
- cairo=1.18.0
- chardet=4.0.0
- charset-normalizer=3.3.2
- click=8.1.7
- comm=0.2.2
- dataclasses=0.8
- debugpy=1.6.7
- decorator=5.1.1
- defusedxml=0.7.1
- exceptiongroup=1.2.0
- executing=2.0.1
- expat=2.6.2
- fltk=1.3.9
- font-ttf-dejavu-sans-mono=2.37
- font-ttf-inconsolata=2.001
- font-ttf-source-code-pro=2.030
- font-ttf-ubuntu=0.83
- fontconfig=2.14.2
- fonts-anaconda=1
- fonts-conda-ecosystem=1
- freeimage=3.18.0
- freetype=2.12.1
- freetype-py=2.3.0
- gettext=0.21.0
- glib=2.78.4
- glib-tools=2.78.4
- gmp=6.3.0
- greenlet=3.0.1
- h5py=3.11.0
- hdf5=1.12.1
- icu=73.2
- idna=3.7
- imagesize=1.4.1
- imath=3.1.9
- importlib-metadata=7.2.0
- importlib_metadata=7.2.0
- ipykernel=6.29.4
- ipython=8.25.0
- jedi=0.19.1
- jinja2=3.1.4
- jupyter-cache=1.0.0
- jupyter_client=8.6.2
- jupyter_core=5.7.2
- jupyterlab_pygments=0.2.2
- jxrlib=1.1
- krb5=1.21.2
- latexcodec=2.0.1
- lcms2=2.16
- lerc=4.0.0
- libblas=3.9.0
- libcblas=3.9.0
- libcurl=8.7.1
- libcxx=17.0.6
- libdeflate=1.20
- libedit=3.1.20191231
- libev=4.33
- libexpat=2.6.2
- libffi=3.4.4
- libgfortran=5.0.0
- libgfortran5=11.3.0
- libglib=2.78.4
- libiconv=1.16
- libjpeg-turbo=3.0.0
- liblapack=3.9.0
- libnghttp2=1.58.0
- libpng=1.6.39
- libraw=0.21.1
- libsodium=1.0.18
- libsqlite=3.46.0
- libssh2=1.11.0
- libtiff=4.6.0
- libwebp-base=1.3.2
- libxcb=1.15
- libxml2=2.10.4
- libzlib=1.2.13
- llvm-openmp=14.0.6
- lz4-c=1.9.4
- lzo=2.10
- markdown-it-py=3.0.0
- matplotlib-inline=0.1.7
- mdit-py-plugins=0.4.1
- msgpack-python=1.0.3
- myst-nb=1.1.1
- nbsphinx=0.9.5
- ncurses=6.4
- nest-asyncio=1.6.0
- nptyping=2.5.0
- numexpr=2.8.7
- occt=7.7.2
- openexr=3.2.1
- openjpeg=2.5.0
- openssl=3.3.1
- packaging=24.1
- parso=0.8.4
- pcre2=10.42
- pexpect=4.9.0
- pickleshare=0.7.5
- pip=24.0
- pixman=0.43.4
- platformdirs=4.2.2
- prompt-toolkit=3.0.47
- psutil=5.9.0
- pthread-stubs=0.3
- ptyprocess=0.7.0
- pure_eval=0.2.2
- py-cpuinfo=9.0.0
- pybtex=0.24.0
- pybtex-docutils=1.0.3
- pycairo=1.23.0
- pygments=2.18.0
- pynrrd=1.0.0
- pysocks=1.7.1
- pytables=3.9.2
- python=3.11.8
- python-dateutil=2.9.0
- python-fastjsonschema=2.16.2
- python_abi=3.11
- pytz=2024.1
- pyyaml=6.0.1
- pyzmq=25.1.2
- rapidjson=1.1.0
- readline=8.2
- reportlab=4.2.2
- requests=2.32.3
- rlpycairo=0.2.0
- rst2pdf=0.102
- setuptools=69.5.1
- six=1.16.0
- smartypants=2.0.1
- snowballstemmer=2.2.0
- soupsieve=2.5
- sphinx=7.3.7
- sphinx_rtd_theme=2.0.0
- sphinxcontrib-applehelp=1.0.2
- sphinxcontrib-bibtex=2.6.2
- sphinxcontrib-devhelp=1.0.2
- sphinxcontrib-htmlhelp=2.0.0
- sphinxcontrib-jquery=4.1
- sphinxcontrib-jsmath=1.0.1
- sphinxcontrib-qthelp=1.0.3
- sphinxcontrib-serializinghtml=1.1.10
- sqlite=3.45.3
- stack_data=0.6.2
- tabulate=0.9.0
- tk=8.6.14
- tornado=6.4.1
- traitlets=5.14.3
- trame=3.6.3
- trame-client=3.2.0
- trame-server=3.0.2
- typing-extensions=4.12.2
- typing_extensions=4.12.2
- typish=1.9.3
- urllib3=2.2.2
- wcwidth=0.2.13
- wheel=0.43.0
- wslink=2.1.1
- xorg-fixesproto=5.0
- xorg-kbproto=1.0.7
- xorg-libice=1.1.1
- xorg-libsm=1.2.4
- xorg-libx11=1.8.9
- xorg-libxau=1.0.11
- xorg-libxdmcp=1.1.3
- xorg-libxext=1.3.4
- xorg-libxfixes=5.0.3
- xorg-libxrender=0.9.11
- xorg-renderproto=0.11.1
- xorg-xextproto=7.3.0
- xorg-xproto=7.0.31
- xz=5.4.6
- yaml=0.2.5
- zeromq=4.3.5
- zipp=3.19.2
- zlib=1.2.13
- zlib-ng=2.0.7
- zstd=1.5.5
- pip:
- addict==2.4.0
- aiosignal==1.3.1
- anyio==4.4.0
- argon2-cffi==23.1.0
- argon2-cffi-bindings==21.2.0
- arrow==1.3.0
- async-lru==2.0.4
- attrs==23.2.0
- babel==2.15.0
- bleach==6.1.0
- blinker==1.8.2
- certifi==2024.6.2
- cffi==1.16.0
- configargparse==1.7
- contourpy==1.2.1
- cycler==0.12.1
- cython==3.0.10
- dash==2.17.1
- dash-core-components==2.0.0
- dash-html-components==2.0.0
- dash-table==5.0.0
- docutils==0.21.2
- fastjsonschema==2.20.0
- flask==3.0.3
- fonttools==4.53.0
- fqdn==1.5.1
- frozenlist==1.4.1
- gmsh==4.13.1
- gmsh-interop==2024.1
- h11==0.14.0
- httpcore==1.0.5
- httpx==0.27.0
- ipywidgets==8.1.3
- isoduration==20.11.0
- itsdangerous==2.2.0
- joblib==1.4.2
- json5==0.9.25
- jsonpointer==3.0.0
- jsonschema==4.22.0
- jsonschema-specifications==2023.12.1
- jupyter==1.0.0
- jupyter-console==6.6.3
- jupyter-events==0.10.0
- jupyter-lsp==2.2.5
- jupyter-server==2.14.1
- jupyter-server-terminals==0.5.3
- jupyterlab==4.2.2
- jupyterlab-pygments==0.3.0
- jupyterlab-server==2.27.2
- jupyterlab-widgets==3.0.11
- kiwisolver==1.4.5
- manifold3d==2.5.1
- markupsafe==2.1.5
- matplotlib==3.9.0
- mdurl==0.1.2
- meshio==5.3.5
- meshpy==2022.1.3
- mistune==3.0.2
- more-itertools==10.3.0
- msgpack==1.0.8
- multidict==6.0.5
- myst-parser==4.0.0
- nbclient==0.10.0
- nbconvert==7.16.4
- nbformat==5.10.4
- notebook==7.2.1
- notebook-shim==0.2.4
- numpy==1.24.3
- numpy-stl==3.1.1
- open3d==0.18.0
- overrides==7.7.0
- pandas==2.2.2
- pandocfilters==1.5.1
- pillow==10.3.0
- plotly==5.22.0
- pooch==1.8.2
- prometheus-client==0.20.0
- pycparser==2.22
- pymesh==1.0.2
- pymeshfix==0.17.0
- pyparsing==3.1.2
- pyquaternion==0.9.9
- python-json-logger==2.0.7
- python-utils==3.8.2
- pytools==2024.1.5
- pyvista==0.43.10
- qtconsole==5.5.2
- qtpy==2.4.1
- referencing==0.35.1
- retrying==1.3.4
- rfc3339-validator==0.1.4
- rfc3986-validator==0.1.1
- rich==13.7.1
- rpds-py==0.18.1
- rtree==1.2.0
- scikit-learn==1.5.0
- scipy==1.13.1
- scooby==0.10.0
- send2trash==1.8.3
- simpleitk==2.3.1
- sniffio==1.3.1
- sqlalchemy==2.0.32
- stl==0.0.3
- tenacity==8.4.1
- terminado==0.18.1
- tetgen==0.6.4
- threadpoolctl==3.5.0
- tinycss2==1.3.0
- tqdm==4.66.4
- trame-vtk==2.8.9
- trame-vuetify==2.6.0
- trimesh==4.4.1
- types-python-dateutil==2.9.0.20240316
- tzdata==2024.1
- uri-template==1.3.0
- vtk==9.3.0
- webcolors==24.6.0
- webencodings==0.5.1
- websocket-client==1.8.0
- werkzeug==3.0.3
- widgetsnbextension==4.0.11
- yarl==1.9.4
prefix: /Users/alessandromastrofini/LocalFiles/acePlaque-PV/T00_Common/mesherENV_PV